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Biological sequence motif visualization
Weblogo
app generates the graphical representation of the conservation and variation of the regions in a given sequence motif described using Position Weight Matrix (PWM).
Please login to update PWM data
A: 0.21 0.01 0.01 0.01 0.01 0.80 0.19 0.16 0.28 0.12 0.05 0.75 0.01 0.01 G: 0.27 0.95 0.97 0.13 0.12 0.02 0.36 0.56 0.48 0.02 0.86 0.12 0.02 0.01 C: 0.30 0.02 0.01 0.05 0.85 0.05 0.36 0.20 0.14 0.16 0.08 0.11 0.77 0.86 T: 0.22 0.02 0.01 0.81 0.02 0.13 0.09 0.08 0.10 0.70 0.01 0.02 0.20 0.12
Protein Data
DNA/RNA Data
In this app, I implemented both my method and
seqLogo
using R
bioconductor package
.
Designed & Developed by
Thanh Le
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